Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015884357.1_cds_XP_016438799.1_34426
CDS Infomation

[gene=LOC107764710] [db_xref=GeneID:107764710] [protein=SNF1-related protein kinase catalytic subunit alpha KIN10-like isoform X1] [protein_id=XP_016438799.1] [location=complement(join(18197..18268,18388..18564,18680..18832,22853..23095,23460..23597,23829..23912,23993..24082,25180..25365,26072..26203,26540..26722,26811..26995,28344..28533))] [gbkey=CDS]
Sequence

ATGGATGGATCAACAGTCCAAAGCAGCAGCAGTGTGGACTCATTTTTACGGAACTATAAG
CTCGGGAAAACTCTTGGCATTGGATCGTTTGGCAAAGTTAAAATAGCTGAACATACCCGA
ACTGGGCACAAAGTTGCTGTCAAGATTCTTAATCGCCGAAAAATCAGGAACATGGACATG
GAAGAAAAAGTGCGAAGGGAAATCAAAATATTGAGATTGTTCATGCATCCTCATATTATA
CGGCTTTATGAGGTAATAGAGACACCTTCAGATATATATGTTGTGATGGAATATGTGAAA
TCTGGCGAGCTGTTTGATTACATTGTTGAGAAGGGCAGATTGCAGGAGGATGAAGCTCGT
AATTTTTTTCAGCAGATAATTTCTGGTGTTGAATACTGCCATAGAAACATGGTGGTTCAT
AGGGACCTTAAGCCCGAAAACCTCCTTCTGGATTCCAAATGGAATGTGAAGATAGCAGAT
TTTGGTTTGAGCAATATCATGCGTGATGGTCATTTTCTGAAGACAAGTTGTGGAAGCCCG
AATTATGCTGCCCCAGAGGTTATATCAGGAAAATTATATGCTGGCCCTGAGGTAGATGTA
TGGAGCTGTGGCGTTATTCTTTATGCTCTTCTCTGTGGCACCCTTCCATTTGACGATGAA
AACATTCCCAACCTTTTTAAGAAAATAAAGGGCGGAATATATACTCTGCCCAGCCATTTA
TCAGCTGGTGCAAGGGATTTGATTCCAAGGATGCTTATAGTTGACCCAATGAAGCGAATG
ACTATTCCTGAGATTCGCTTGCACCCTTGGTTCCAAGCTCATCTGCCACGTTATTTGGCC
GTACCTCCACCAGATACAATGCAACAAGCCAAGAAGATCGATGAAGAGATTCTTCAAGAG
GTGGTTAAGATGGGATTTGACAGGAGCAACCTTATTGAATCACTTCGCAATAGAGTCCAA
AATGAGGGCACTGTCGCATATTATTTGTTACTAGACAATCGCCATCGTGTTTCCACTGGC
TATCTGGGAGCTGAATTTCAGGAGTTTGTGGAATATGGCTACAATCGAAACAATTCAAAT
GAAGCTGTTACTTCCCCTGTTGGGCAACGCTTCCCAGGAATAATGGATTATCAGCAAGCT
GGTGCGAGACAGTTTCCCATCGAAAGAAAATGGGCTCTTGGACTCCAGTCTCGGGCACAT
CCACGTGAGATAATGACTGAAGTTCTGAAAGCTCTGCAAGAACTAAACGTGTGTTGGAAA
AAGATTGGTCAATATAACATGAAATGTCGATGGATTCCTAGCGTACCAGGTCATCATGAA
GGCATGGGTATTAATTCTATGCACGGGAGTCAGTTCTTCGGAGATGATTCAACCATTACT
GAGAATGATGGGGTCTCTAAATTAACAAATGTGGTCAAGTTTGAAGTTCAGATGACCAAA
GAAGCCATAATTACTGATGCTATCACTTACATTAGAGAGCTACAAACAAATGTGAGCAAC
CTAACTGAGCAGCTTCTAGAAATGGAGGCACCTCATATAGAGGAATTGGAGACAAAAAAT
GAAGAGATTATTGATGCTGCAGAGCCTGAAGTTGAAGTGGCTCACATTGGTACAAGTAAG
CTTTGGATAAAGATAGTTTGCCAGAAGAAAAGAGGTGGATTTACTAAACTGATGGAGGCA
ATGAATGTTGTTGGATTTGATCTCAATGACACCAGTGTCACTGCCTCAAAAGGAACACTT
CTTGTTACTTCATCTGTGGAGGTGGTTCGCGGTGGACTAATTGAAGCTCATCAAATCAGA
GAGATCTTGCTGGAGATCATTCGCGGAATCTAG

Peptide Sequence

PEP ID

XP_016438799.1
PEP Infomation

PREDICTED: SNF1-related protein kinase catalytic subunit alpha KIN10-like isoform X1 [Nicotiana tabacum]
Sequence

MDGSTVQSSSSVDSFLRNYKLGKTLGIGSFGKVKIAEHTRTGHKVAVKILNRRKIRNMDM
EEKVRREIKILRLFMHPHIIRLYEVIETPSDIYVVMEYVKSGELFDYIVEKGRLQEDEAR
NFFQQIISGVEYCHRNMVVHRDLKPENLLLDSKWNVKIADFGLSNIMRDGHFLKTSCGSP
NYAAPEVISGKLYAGPEVDVWSCGVILYALLCGTLPFDDENIPNLFKKIKGGIYTLPSHL
SAGARDLIPRMLIVDPMKRMTIPEIRLHPWFQAHLPRYLAVPPPDTMQQAKKIDEEILQE
VVKMGFDRSNLIESLRNRVQNEGTVAYYLLLDNRHRVSTGYLGAEFQEFVEYGYNRNNSN
EAVTSPVGQRFPGIMDYQQAGARQFPIERKWALGLQSRAHPREIMTEVLKALQELNVCWK
KIGQYNMKCRWIPSVPGHHEGMGINSMHGSQFFGDDSTITENDGVSKLTNVVKFEVQMTK
EAIITDAITYIRELQTNVSNLTEQLLEMEAPHIEELETKNEEIIDAAEPEVEVAHIGTSK
LWIKIVCQKKRGGFTKLMEAMNVVGFDLNDTSVTASKGTLLVTSSVEVVRGGLIEAHQIR
EILLEIIRGI

Transcript Sequence

Gene sequence data has not been registered.